miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|282424379|gb|GW150273.1|GW150273 GAATTAAAACAAGATGGCTTCTGGTTCTCGTGTTCTTGTCTATGGAGGAAAAGGAGCTCTTGGATCAGCTGTAGTTAGCT
ACTTTAAAGGAAAGAACTGGTGGGTTGGGTCTATTGATTTGTTTGCTAATGAAGAAGCTGATGTTAATATCCTAATAACA
GAGACTGAGTCCTGGACCAAACAGTCAGAACAAGTTTGTGGTAAAGTAGGTGAAGTGTTGGGGGACAGTAAAGTAGACAG
CATACTGTGTGTGGCTGGGGGCTGGGCTGGGGGTAATGCCAGCAGTCCAGATTTAGTTAAAAACTCTGATCTCATGTGGA
AACAAAGTGTTTGGACGTCAGTAATAGCATCTTCACTGGCTGCGAATTACATGAAAGAGGGCGGGGTCATTGTATTAACT
GGAGCTAAAGCTGCTTTAGAAGGAACACCAGGTATGATCGGATATGGTCTAGCAAAAGCTGCCGTCCATCAATTAATTAA
AAGTTTATCATCTCCTGACAATGGACTCCCATCTAATGCAATAGCACTAGGAATATTACCCATTACTCTAGACACTCCCA
TGAACAGAAAGTTCATGTCCAATGCTGACTTCAGCCAATGGACACCGTTGGATACTGTTGCTAGCAAGCTATTTGATTGG
TCGGAGGGTAAGGATCGTCC




Most similar to sp|P11348|DHPR_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
           GN=Qdpr PE=1 SV=1
          Length = 241

 Score =  280 bits (717), Expect = 4e-75
 Identities = 131/216 (60%), Positives = 166/216 (76%), Gaps = 2/216 (0%)
 Frame = +2

Query: 17  ASGS--RVLVYGGKGALGSAVVSYFKGKNWWVGSIDLFANEEADVNILITETESWTKQSE 190
           ASG   RVLVYGG+GALGS  V  F+ +NWWV SID+  NEEA  ++++  T+S+T+Q++
Sbjct: 3   ASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQAD 62

Query: 191 QVCGKVGEVLGDSKVDSILCVAGGWAGGNASSPDLVKNSDLMWKQSVWTSVIASSLAANY 370
           QV  +VG++LGD KVD+ILCVAGGWAGGNA S  L KN DLMWKQS+WTS I+S LA  +
Sbjct: 63  QVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH 122

Query: 371 MKEGGVIVLTGAKAALEGTPGMIGYGLAKAAVHQLIKSLSSPDNGLPSNAIALGILPITL 550
           +KEGG++ L GAKAAL+GTPGMIGYG+AK AVHQL +SL+  ++G+PS A A+ +LP+TL
Sbjct: 123 LKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL 182

Query: 551 DTPMNRKFMSNADFSQWTPLDTVASKLFDWSEGKDR 658
           DTPMNRK M  ADFS WTPL+ +     DW  G  R
Sbjct: 183 DTPMNRKSMPEADFSSWTPLEFLVETFHDWITGNKR 218